Maps

Map format from plink which is space delimited.

Fields

  • chr - chromosome of coordinate (1-22, X)

  • var - variant identifier

  • pos_cM - Position in centimorgans

  • pos_bp - Base pair coordinate

chr var pos_cM pos_bp

Beagle Genetic Maps used in simgenotype (GRCh38): https://bochet.gcc.biostat.washington.edu/beagle/genetic_maps/